Karyotype DB
Index
Help

Karyotype DB entry

ID KARY-1000016 Organism Arabidopsis thaliana
Karyotype features
chromosome number 10 sex chromosomes
gametic number 2n sex system
basic set 2x B chromosomes
karyotype formular 2n = 10 lampbrush chromosomes
polyploid
Chromosome set
chromosome formular
cell cycle stage
polytene
Metaphase
Chromosomes
chr.
CP
NOR
SAT
length
sex chr.
total
[um]
short (p/s)
[um]
long (q/l)
[um]
r
q/p
CI
[%]
Cr
-
HCL
[%]
1 No 2.8 0.53 25.4
2 No 2.4 0.53 22.2
3 No 2.2 0.58 19.6
4 No 1.5 0.73 13.4
5 Yes 2.1 0.52 19.4
Legend: CP = centromere position; NOR = nucleolus organizing region; SAT = SAT-chromosome; r = arm ratio; CI = centromerer index = p/(p+q) x 100 ; Cr = centromere ratio = q/(p+q); HCL = haploid complement length
Hybridizations
chr.
probe
position [FL]
position/band
Probes
name
probe type
gene
occur.
Authors
  • Ambros, P.,
  • Schweizer, D.,
Publications
  • Ambros, P. Schweizer, D. (1976) The Giemsa C Banded Karyotype of Arabidopsis thaliana. Arabid. Inf. Serv. 13: 167-171. [Journal article] Web: www.arabidopsis.org/ais/1976/ambro-1976-aabei.html
  • Schweizer, D. Ambros, P. Grundler, P. Varga, F. (1978) Attempts to Relate Cytological and Molecular Chromosome Data of Arabidopsis thaliana to Its Genetic Linkage Map. Arabid. Inf. Serv. 25: 27. [Journal article] Web: www.arabidopsis.org/ais/1987/schwe-1987-aabux.html
  • Huala, E. Dickerman, A. Garcia-Hernandez, M. Weems, D. Reiser, L. LaFond, F. Hanley, D. Kiphart, D. Zhuang, J. Huang, W. Mueller, L. Bhattacharyya, D. Bhaya, D. Sobral, B. Beavis, B. Somerville, C. Rhee, S.Y. (2001) The Arabidopsis Information Resource (TAIR): A comprehensive database and web-based information retrieval, analysis, and visualization system for a model plant. Nucl. Acids Res. 29(1): 102-105. [Journal article] Web: www.arabidopsis.org
Database entry
ID
entry created
entry updated
DB release
DB release date
KARY-1000016
2003-10-26
0.6
2004-12-19

KaryotypeDB 2004 by Mario Nenno. All rights reserved. www.nenno.it Query: 2018-12-18 19:10:00